Browse of TCMCG007C29422 protein

CDS

Accession Number	TCMCG007C29422
gbkey	CDS
Protein Id	XP_009142549.1
Location	complement(join(359928..359975,360059..360178,360286..360468,360578..360717,360806..361051,361136..361253,361344..361419,361509..361663,361756..361866,362104..362271,362561..362695,362801..362877,362968..363016,363117..363173,363300..363389,363483..363546,363639..363787,363886..363888))
Gene	LOC103866392
GeneID	103866392
Organism	Brassica rapa

Protein

Length	662aa
Molecule type	protein
Topology	linear
Data_file_division	PLN
dblink	BioProject:PRJNA249065
db_source	XM_009144301.3
Definition	long chain acyl-CoA synthetase 1 isoform X1 [Brassica rapa]

EGGNOG-MAPPER Annotation

COG_category	I
Description	Long-chain-fatty-acid--CoA ligase family protein
KEGG_TC	4.C.1.1
KEGG_Module	M00086        [VIEW IN KEGG]
KEGG_Reaction	R01280        [VIEW IN KEGG]
KEGG_rclass	RC00004        [VIEW IN KEGG] RC00014        [VIEW IN KEGG]
BRITE	ko00000        [VIEW IN KEGG] ko00001        [VIEW IN KEGG] ko00002        [VIEW IN KEGG] ko01000        [VIEW IN KEGG] ko01004        [VIEW IN KEGG] ko04147        [VIEW IN KEGG]
KEGG_ko	ko:K01897        [VIEW IN KEGG]
EC	6.2.1.3        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway	ko00061        [VIEW IN KEGG] ko00071        [VIEW IN KEGG] ko01100        [VIEW IN KEGG] ko01212        [VIEW IN KEGG] ko02024        [VIEW IN KEGG] ko03320        [VIEW IN KEGG] ko04146        [VIEW IN KEGG] ko04216        [VIEW IN KEGG] ko04714        [VIEW IN KEGG] ko04920        [VIEW IN KEGG] map00061        [VIEW IN KEGG] map00071        [VIEW IN KEGG] map01100        [VIEW IN KEGG] map01212        [VIEW IN KEGG] map02024        [VIEW IN KEGG] map03320        [VIEW IN KEGG] map04146        [VIEW IN KEGG] map04216        [VIEW IN KEGG] map04714        [VIEW IN KEGG] map04920        [VIEW IN KEGG]
GOs	GO:0001676        [VIEW IN EMBL-EBI] GO:0003674        [VIEW IN EMBL-EBI] GO:0003824        [VIEW IN EMBL-EBI] GO:0004467        [VIEW IN EMBL-EBI] GO:0005575        [VIEW IN EMBL-EBI] GO:0005622        [VIEW IN EMBL-EBI] GO:0005623        [VIEW IN EMBL-EBI] GO:0005737        [VIEW IN EMBL-EBI] GO:0005783        [VIEW IN EMBL-EBI] GO:0006082        [VIEW IN EMBL-EBI] GO:0006629        [VIEW IN EMBL-EBI] GO:0006631        [VIEW IN EMBL-EBI] GO:0008150        [VIEW IN EMBL-EBI] GO:0008152        [VIEW IN EMBL-EBI] GO:0009058        [VIEW IN EMBL-EBI] GO:0009059        [VIEW IN EMBL-EBI] GO:0009987        [VIEW IN EMBL-EBI] GO:0010025        [VIEW IN EMBL-EBI] GO:0010143        [VIEW IN EMBL-EBI] GO:0010166        [VIEW IN EMBL-EBI] GO:0012505        [VIEW IN EMBL-EBI] GO:0015645        [VIEW IN EMBL-EBI] GO:0016405        [VIEW IN EMBL-EBI] GO:0016874        [VIEW IN EMBL-EBI] GO:0016877        [VIEW IN EMBL-EBI] GO:0016878        [VIEW IN EMBL-EBI] GO:0019752        [VIEW IN EMBL-EBI] GO:0031957        [VIEW IN EMBL-EBI] GO:0032787        [VIEW IN EMBL-EBI] GO:0043170        [VIEW IN EMBL-EBI] GO:0043226        [VIEW IN EMBL-EBI] GO:0043227        [VIEW IN EMBL-EBI] GO:0043229        [VIEW IN EMBL-EBI] GO:0043231        [VIEW IN EMBL-EBI] GO:0043436        [VIEW IN EMBL-EBI] GO:0044237        [VIEW IN EMBL-EBI] GO:0044238        [VIEW IN EMBL-EBI] GO:0044255        [VIEW IN EMBL-EBI] GO:0044281        [VIEW IN EMBL-EBI] GO:0044424        [VIEW IN EMBL-EBI] GO:0044444        [VIEW IN EMBL-EBI] GO:0044464        [VIEW IN EMBL-EBI] GO:0071704        [VIEW IN EMBL-EBI] GO:1901568        [VIEW IN EMBL-EBI] GO:1901570        [VIEW IN EMBL-EBI] GO:1901576        [VIEW IN EMBL-EBI]

Sequence

CDS:   ATGAGAATGAAGTCTTTCGCGGCAAAGGTGGAAGAAGGAGTCAAAGGGGAAAACGGGAAGCCGTCAGTAGGTCCGGTGTACCGGAATCTTTTGTCGGAAAAAGGGTTTCCTCCAATAGATTCTGATATCACCACTGCTTGGGACATATTCTGTAAATCTGTGGAGAAATTCCCTGGCAACAAGATGCTTGGATGGCGTCCAATCGTAGATAAGAAGGTTGGACCGTATGTGTGGAAAACGTACAAGGAAGCATATGAAGAAGTTCTGCAGATTGGCTCTGCATTACGTGCTCTCGGAGCTGAGCCTGGGTGTCGAGTGGGAATCTATGGAATTAATTGTCCTCAGTGGATCATAGCAATGGAGGCTTGTGCAGCTCACACTCTAATCTGTGTACCTCTATATGATACATTGGGTTCTGGAGCCGTGGATTATATCGTTGATCACGCGGAAATCGATTTTGTATTCGTCCAAGACACCAAGATTAAAGGGCTTCTTGAGCCAGATTCCATATGTTCTAAACGGCTAAAAGCTATAGTTTCCTTCACTAATGTGAGCAAAGAAGATAGCATCAAGGCTTCAGAAATTGGAGTCAAAACGTACTCTTGGCTCGATTTTCTTCATATGGGACGTGAGAAACCGGAAGAGATTAGTCCACCTAAACCATTTAACACATGCACCATAATGTACACAAGCGGCACGAGTGGTGACCCTAAAGGTGTGGTTTTGACTCACGAAGCGGTGGCGACTTTCGTTGTTGGGGTGGATCTCTTCATGGACCAGTTCGAAGACAAGATGACACATGAAGATGTGTATCTCTCCTTCTTGCCGCTGGCTCATATTCTTGACCGTATGAATGAGGAATACTTCTTTCGCAAAGGGGCTTCCGTTGGCTATTACCATGGAGATTTGAATGTGTTACGTGATGACATTCAAGAATTGAAACCAACTTATCTAGCTGGAGTTCCAAGAGTGTTCGAGAGAATTCACGAGGGTATTCAAAAGGCTCTTCAGGAACTTAACCCTAGAAGGAGATTTATCTTCAATGCTCTCTACAAACACAAGCTTTCATGGTTGAATCGTGGATACTCGCATAGCAAAGCTTCACCCATGGCTGATTTAATTGCTTTCAGAAAGATTAGAGACAAATTGGGAGGTCGAATCCGGTTGCTAATATCTGGAGGAGCACCTTTGAGCCCTGAGATTGAAGAGTTCTTGAGAGTTACTTGTTGTTGCTTTGTCCTCCAAGGCTACGGTCTGACGGAGACGCTTGGAGGAACGGCTTTGTGTGTACCGGATGAGATGTGTATGTTAGGGACAGTCGGTATACCGGCGGTTTACAACGAGATAAGGCTTGAGGAGGTGGCTGAAATGGGCTACGACCCACTCGGTGAAAATCCAGCAGGCGAGATCTGTATAAAAGGAAAATGTTTGTTTTCTGGGTATTACAAGAACCCCGAGCTTACTGATGAAGTCTTGAAAGACGGATGGTTCCATACAGGAGATATAGGTGAGATTCAACCAAATGGGGTGCTCAAGATAATTGATCGTAAAAAGAATTTAATTAAACTTTCTCAAGGAGAGTACGTTGCTCTTGAGAACTTGGAAAACATCTACGGTCAAAACTCTCTTGTCCAAGAGATATGGGTTTATGGAGACAGCTTCAAATCAATGCTTGTCGCGGTGATTGTTCCAAACCCTGAAGTCGTGAACCGGTGGGCTAAAGATCTCGGTTTAAATAAACCATTCGAAGAACTATGTTCTCTCACGGAGTTGCAAGAACACATCATTTTAGAACTGAAGTCCACGGCAGAGAAGAACAAGCTAAAAAGGTTTGAGTACATCAAAGCAGTGACGGTGGAGATAAAACCTTTCGACTTAGAGAGAGACTTGGTGACTGCGACGCTCAAGAATAAGAGGAACAATCTTCTCAAGTATTATCAGGTACAAGTCGACGAGATGTACCGAAAATTGGCGTCCAAGAAAATCTGA

Protein:   MRMKSFAAKVEEGVKGENGKPSVGPVYRNLLSEKGFPPIDSDITTAWDIFCKSVEKFPGNKMLGWRPIVDKKVGPYVWKTYKEAYEEVLQIGSALRALGAEPGCRVGIYGINCPQWIIAMEACAAHTLICVPLYDTLGSGAVDYIVDHAEIDFVFVQDTKIKGLLEPDSICSKRLKAIVSFTNVSKEDSIKASEIGVKTYSWLDFLHMGREKPEEISPPKPFNTCTIMYTSGTSGDPKGVVLTHEAVATFVVGVDLFMDQFEDKMTHEDVYLSFLPLAHILDRMNEEYFFRKGASVGYYHGDLNVLRDDIQELKPTYLAGVPRVFERIHEGIQKALQELNPRRRFIFNALYKHKLSWLNRGYSHSKASPMADLIAFRKIRDKLGGRIRLLISGGAPLSPEIEEFLRVTCCCFVLQGYGLTETLGGTALCVPDEMCMLGTVGIPAVYNEIRLEEVAEMGYDPLGENPAGEICIKGKCLFSGYYKNPELTDEVLKDGWFHTGDIGEIQPNGVLKIIDRKKNLIKLSQGEYVALENLENIYGQNSLVQEIWVYGDSFKSMLVAVIVPNPEVVNRWAKDLGLNKPFEELCSLTELQEHIILELKSTAEKNKLKRFEYIKAVTVEIKPFDLERDLVTATLKNKRNNLLKYYQVQVDEMYRKLASKKI